mods to shhhercommand and seqerrorcommand

[mothur.git] / shhhercommand.cpp

diff --git a/shhhercommand.cpp b/shhhercommand.cpp
index e2f2636e491294a7e260e34340cef1e4e8273d40..7768fa74f1d58fa4f5e15f1031c6046a5bccb58f 100644 (file)
--- a/shhhercommand.cpp
+++ b/shhhercommand.cpp
@@ -994,10 +994,10 @@ void ShhherCommand::flowDistParentFork(string distFileName, int startSeq, int st
                                float flowDistance = calcPairwiseDist(mapUniqueToSeq[i], mapUniqueToSeq[j]);
 
                                if(flowDistance < 1e-6){
-                                       outStream << seqNameVector[mapUniqueToSeq[i]] << '\t' << seqNameVector[mapUniqueToSeq[j]] << '\t' << 0.000000 << endl;
+                                       outStream << mapUniqueToSeq[i] << '\t' << mapUniqueToSeq[j] << '\t' << 0.000000 << endl;
                                }
                                else if(flowDistance <= cutoff){
-                                       outStream << seqNameVector[mapUniqueToSeq[i]] << '\t' << seqNameVector[mapUniqueToSeq[j]] << '\t' << flowDistance << endl;
+                                       outStream << mapUniqueToSeq[i] << '\t' << mapUniqueToSeq[j] << '\t' << flowDistance << endl;
                                }
                        }
                        if(i % 100 == 0){