working on pam

[mothur.git] / shen.h

diff --git a/shen.h b/shen.h
index a96abe9ba3d3222680fd5e99470a95ca6d4d472c..ad0eda47c54b7d8c0f081e908471ab16eb85d717 100644 (file)
--- a/shen.h
+++ b/shen.h
@@ -11,7 +11,6 @@
  */
 
 #include "calculator.h"
-#include "globaldata.hpp"
 
 /* This class implements the shen calculator on single group. 
  It is a child of the calculator class. */
@@ -21,12 +20,13 @@
 class Shen : public Calculator  {
        
 public: 
-       Shen(int size) : m(size), Calculator("shen", 1, false) {};
+       Shen(int size, int n) : f(size), abund(n), Calculator("shen", 1, false) {};
        EstOutput getValues(SAbundVector*);     
        EstOutput getValues(vector<SharedRAbundVector*>) {return data;};
+       string getCitation() { return "http://www.mothur.org/wiki/Shen"; }
 private:
-       int m;
-       GlobalData* globaldata;
+       int f;
+       int abund;
 };