changing command name classify.shared to classifyrf.shared

[mothur.git] / sharedthetan.cpp

diff --git a/sharedthetan.cpp b/sharedthetan.cpp
index 7c42a18d662f9b8d976a39515a47c4e79d509e22..644adee677820f92a7c8cf87c41d65908a1e957b 100644 (file)
--- a/sharedthetan.cpp
+++ b/sharedthetan.cpp
@@ -20,14 +20,14 @@ EstOutput ThetaN::getValues(vector<SharedRAbundVector*> shared) {
                numerator = 0.0; denominator = 0.0; thetaN = 0.0; sumSharedA = 0.0; sumSharedB = 0.0; a = 0.0; b = 0.0; d = 0.0;
                
                //get the total values we need to calculate the theta denominator sums
-               for (int i = 0; i < shared[0]->size(); i++) {
+               for (int i = 0; i < shared[0]->getNumBins(); i++) {
                        //store in temps to avoid multiple repetitive function calls
                        Atotal += shared[0]->getAbundance(i);
                        Btotal += shared[1]->getAbundance(i);
                }
                
                //calculate the theta denominator sums
-               for (int j = 0; j < shared[0]->size(); j++) {
+               for (int j = 0; j < shared[0]->getNumBins(); j++) {
                        //store in temps to avoid multiple repetitive function calls
                        tempA = shared[0]->getAbundance(j);
                        tempB = shared[1]->getAbundance(j);