changes while testing

[mothur.git] / sharedrabundfloatvector.cpp

diff --git a/sharedrabundfloatvector.cpp b/sharedrabundfloatvector.cpp
index b8b91028625cec0cfd1ef59d7dc82ab67b40cde5..71c868b158ab41c2b8d72e7dac301998e2c39537 100644 (file)
--- a/sharedrabundfloatvector.cpp
+++ b/sharedrabundfloatvector.cpp
@@ -152,8 +152,6 @@ SharedRAbundFloatVector::SharedRAbundFloatVector(ifstream& f) : DataVector(), ma
                
                m->saveNextLabel = nextLabel;
                m->setAllGroups(allGroups);
-        for (int i = 0; i < allGroups.size(); i++) { cout << allGroups[i] << endl; }
-       
        }
        catch(exception& e) {
                m->errorOut(e, "SharedRAbundFloatVector", "SharedRAbundFloatVector");
@@ -193,6 +191,16 @@ float SharedRAbundFloatVector::getAbundance(int index){
        return data[index].abundance;   
 }
 /***********************************************************************/
+//returns vector of abundances
+vector<float> SharedRAbundFloatVector::getAbundances(){
+    vector<float> abunds;
+    for (int i = 0; i < data.size(); i++) {
+        abunds.push_back(data[i].abundance);
+    }
+    
+       return abunds;
+}
+/***********************************************************************/
 individualFloat SharedRAbundFloatVector::get(int index){
        return data[index];     
 }