sffinfo bug with flow grams right index when clipQualRight=0

[mothur.git] / sharedlistvector.h

diff --git a/sharedlistvector.h b/sharedlistvector.h
index 0586dfff3ce56dbaae588639f14331c312b3fb84..81779257346d4b25dbecf092a6c730162d7d4991 100644 (file)
--- a/sharedlistvector.h
+++ b/sharedlistvector.h
@@ -12,7 +12,7 @@
 
 #include "datavector.hpp"
 #include "groupmap.h"
-#include "globaldata.hpp"
+#include "counttable.h"
 #include "sharedrabundvector.h"
 #include "sharedsabundvector.h"
 
@@ -33,8 +33,8 @@ public:
        SharedListVector();
        SharedListVector(int);
        SharedListVector(ifstream&);
-       SharedListVector(const SharedListVector& lv) : DataVector(lv.label), data(lv.data), maxRank(lv.maxRank), numBins(lv.numBins), numSeqs(lv.numSeqs){globaldata = GlobalData::getInstance(); groupmap = NULL; };
-       ~SharedListVector(){ if (groupmap != NULL) { delete groupmap; } };
+       SharedListVector(const SharedListVector& lv) : DataVector(lv.label), data(lv.data), maxRank(lv.maxRank), numBins(lv.numBins), numSeqs(lv.numSeqs){ groupmap = NULL; countTable = NULL; };
+       ~SharedListVector(){ if (groupmap != NULL) { delete groupmap; } if (countTable != NULL) { delete countTable; } };
        
        int getNumBins()                                                        {       return numBins;         }
        int getNumSeqs()                                                        {       return numSeqs;         }
@@ -58,8 +58,8 @@ public:
        
 private:
        vector<string> data;  //data[i] is a list of names of sequences in the ith OTU.
-       GlobalData* globaldata;
        GroupMap* groupmap;
+    CountTable* countTable;
        int maxRank;
        int numBins;
        int numSeqs;