changes while testing

[mothur.git] / sharedkulczynski.cpp

diff --git a/sharedkulczynski.cpp b/sharedkulczynski.cpp
index c19df537a4f382f5404d8d2c643725599fba2478..5c91ddb65c654c5788c748596e87ddda94ae25f1 100644 (file)
--- a/sharedkulczynski.cpp
+++ b/sharedkulczynski.cpp
@@ -21,7 +21,7 @@ EstOutput Kulczynski::getValues(vector<SharedRAbundVector*> shared) {
 
                data.resize(1,0);
                
-               for (int i = 0; i < shared[0]->size(); i++) {
+               for (int i = 0; i < shared[0]->getNumBins(); i++) {
                        //store in temps to avoid multiple repetitive function calls
                        tempA = shared[0]->getAbundance(i);
                        tempB = shared[1]->getAbundance(i);
@@ -33,7 +33,7 @@ EstOutput Kulczynski::getValues(vector<SharedRAbundVector*> shared) {
                        if ((tempA != 0) && (tempB != 0)) {     S12++; }
                }
                
-               data[0] = S12 / (float)(S1 + S2 - (2 * S12));
+               data[0] = 1.0 - S12 / (float)(S1 + S2 - (2 * S12));
                
                if (isnan(data[0]) || isinf(data[0])) { data[0] = 0; }