worked on parselist and shared commands, removing memory leaks and allowing any numbe...

[mothur.git] / sharedcommand.h

diff --git a/sharedcommand.h b/sharedcommand.h
index e5be50a8b9f80488449db640e65721d32f395a5d..ca0ddd833636e6550cb48832517cdc96f912977e 100644 (file)
--- a/sharedcommand.h
+++ b/sharedcommand.h
@@ -12,7 +12,6 @@
 #include "command.hpp"
 #include "sharedlistvector.h"
 #include "inputdata.h"
-#include "shared.h"
 #include "readotu.h"
 
 /* The shared() command:
@@ -33,16 +32,16 @@ public:
        void help() {}
        
 private:
-       void printSharedData();
+       void printSharedData(vector<SharedRAbundVector*>);
        GlobalData* globaldata;
        ReadOTUFile* read;
        SharedListVector* SharedList;
        InputData* input;
-       Shared* shared;
-       map<string, SharedRAbundVector*>::iterator it;
+       //map<string, SharedRAbundVector*>::iterator it;
        //vector<SharedRAbundVector*> lookup;
        ofstream out;
        string filename;
+       bool firsttime;
 
 };