changes while testing 1.27

[mothur.git] / sharedcommand.cpp

diff --git a/sharedcommand.cpp b/sharedcommand.cpp
index 1150e53735481aea3377ec81f78c0d2544f324e6..e6e790d1687f27a7607555c176bd7b1ebcd44363 100644 (file)
--- a/sharedcommand.cpp
+++ b/sharedcommand.cpp
@@ -825,7 +825,7 @@ int SharedCommand::createSharedFromListGroup(string filename) {
         int error = ListGroupSameSeqs(namesSeqs, SharedList);
         
         if ((!pickedGroups) && (SharedList->getNumSeqs() != numGroupNames)) {  //if the user has not specified any groups and their files don't match exit with error
-            m->mothurOut("Your group file contains " + toString(numGroupNames) + " sequences and list file contains " + toString(SharedList->getNumSeqs()) + " sequences. Please correct."); m->mothurOutEndLine(); 
+            m->mothurOut("Your group file contains " + toString(numGroupNames) + " sequences and list file contains " + toString(SharedList->getNumSeqs()) + " sequences. Please correct."); m->mothurOutEndLine(); m->control_pressed = true;
             
             out.close(); m->mothurRemove(filename); //remove blank shared file you made