added smart distance feature and optimized all commands using line by line processing

[mothur.git] / shared.h

diff --git a/shared.h b/shared.h
index 8625d8b0f4f370c72f4ec2e8961cd85b6c079888..a3f55d5215d5f4b722f069bf53c2501e419eaec4 100644 (file)
--- a/shared.h
+++ b/shared.h
@@ -12,13 +12,7 @@
  
 using namespace std;
 
-#include <iostream>
-#include <fstream>
-#include <iomanip>
-#include <vector>
-#include <string>
-#include <sstream>
-#include <map>
+#include "mothur.h"
 #include "sharedrabundvector.h"
 #include "sharedlistvector.h"
 #include "globaldata.hpp"
@@ -26,8 +20,8 @@ using namespace std;
 class Shared {
        public:
                Shared();
-               ~Shared();
-               void getSharedVectors(int, SharedListVector*);
+               ~Shared() {};
+               void getSharedVectors(SharedListVector*);
                map<string, SharedRAbundVector*> sharedGroups; //string is groupname, SharedVector* is out info for that group
                
        private: