modified trim.seqs to speed up the append with multiple processors

[mothur.git] / sffinfocommand.h

diff --git a/sffinfocommand.h b/sffinfocommand.h
index 7cf357e07499ad5797dec8bbc1e647c163993aa8..d8eb853dae6892711a9004ae9ad670032f47228e 100644 (file)
--- a/sffinfocommand.h
+++ b/sffinfocommand.h
@@ -40,6 +40,9 @@ struct Header {
        unsigned short clipAdapterLeft;
        unsigned short clipAdapterRight;
        string name; //length depends on nameLength
+       string timestamp;
+       string region;
+       string xy;
        
        Header() { headerLength=0; nameLength=0; numBases=0; clipQualLeft=0; clipQualRight=0; clipAdapterLeft=0; clipAdapterRight=0; }
        ~Header() { } 
@@ -80,6 +83,7 @@ private:
        int readCommonHeader(ifstream&, CommonHeader&);
        int readHeader(ifstream&, Header&);
        int readSeqData(ifstream&, seqRead&, int, int);
+       int decodeName(string&, string&, string&, string);
        
        int printCommonHeader(ofstream&, CommonHeader&); 
        int printHeader(ofstream&, Header&);