changed random forest output filename

[mothur.git] / sffinfocommand.h

diff --git a/sffinfocommand.h b/sffinfocommand.h
index dd3c57fa747646a94d26cebd9420fbbf4525f3f6..5ec6e72239d0772548ce10f584ebccb435230d25 100644 (file)
--- a/sffinfocommand.h
+++ b/sffinfocommand.h
@@ -69,8 +69,9 @@ public:
        vector<string> setParameters();
        string getCommandName()                 { return "sffinfo";                                     }
        string getCommandCategory()             { return "Sequence Processing";         }
-       string getOutputFileNameTag(string, string);
+       
        string getHelpString(); 
+    string getOutputPattern(string);   
        string getCitation() { return "http://www.mothur.org/wiki/Sffinfo"; }
        string getDescription()         { return "extract sequences reads from a .sff file"; }
 
@@ -84,7 +85,6 @@ private:
        int mycount, split, numFPrimers, numLinkers, numSpacers, pdiffs, bdiffs, ldiffs, sdiffs, tdiffs;
        set<string> seqNames;
     map<string, int> barcodes;
-    map<string, int> rbarcodes;
     map<string, int> primers;
     vector<string> linker, spacer, primerNameVector, barcodeNameVector, revPrimer;
     vector<vector<int> > numSplitReads;