fixes while testing

[mothur.git] / sffinfocommand.cpp

diff --git a/sffinfocommand.cpp b/sffinfocommand.cpp
index 11754469fc3543c2ac544304606c507755f7ac41..d0ec9e2a93b5109c91e4a940f8b3bbaa64bdfe41 100644 (file)
--- a/sffinfocommand.cpp
+++ b/sffinfocommand.cpp
@@ -25,6 +25,7 @@ vector<string> SffInfoCommand::getValidParameters(){
 //**********************************************************************************************************************
 SffInfoCommand::SffInfoCommand(){      
        try {
+               abort = true;
                //initialize outputTypes
                vector<string> tempOutNames;
                outputTypes["fasta"] = tempOutNames;