added debug flag to mothurOut. added debug parameter to set.dir. added debug code...

[mothur.git] / setdircommand.h

diff --git a/setdircommand.h b/setdircommand.h
index b3b00c46c65b65f1c7f243221ceb4e814a37dbc5..9afc4ea6579d68019dfe04c56aab7119b78d656a 100644 (file)
--- a/setdircommand.h
+++ b/setdircommand.h
@@ -35,7 +35,7 @@ public:
 private:
        CommandFactory* commandFactory;
        string output, input, tempdefault;
-       bool abort;
+       bool abort, debugOnly;
        vector<string> outputNames;