added fontsize to heatmap.sim, paralellized chimera.slayer byGroup for all os's,...

[mothur.git] / setdircommand.cpp

diff --git a/setdircommand.cpp b/setdircommand.cpp
index 0b3379cf230967f48e41c234e26c8c98b593c540..17bad60d2f358b41d4dce9eeafc6a155ad069df7 100644 (file)
--- a/setdircommand.cpp
+++ b/setdircommand.cpp
@@ -101,6 +101,14 @@ int SetDirectoryCommand::execute(){
                
                commandFactory = CommandFactory::getInstance();
                
+               string tag = "";
+#ifdef USE_MPI
+               int pid; 
+               MPI_Comm_rank(MPI_COMM_WORLD, &pid); //find out who we are
+               
+               tag = toString(pid);
+#endif
+               
                m->mothurOut("Mothur's directories:"); m->mothurOutEndLine();
                
                //redirect output
@@ -122,7 +130,7 @@ int SetDirectoryCommand::execute(){
                        
                        //test to make sure directory exists
                        output = m->getFullPathName(output);
-                       string outTemp = output + "temp";
+                       string outTemp = output + tag + "temp";
                        ofstream out;
                        out.open(outTemp.c_str(), ios::trunc);
                        if(!out) {
@@ -154,7 +162,7 @@ int SetDirectoryCommand::execute(){
                        
                        //test to make sure directory exists
                        input = m->getFullPathName(input);
-                       string inTemp = input + "temp";
+                       string inTemp = input + tag + "temp";
                        ofstream in;
                        in.open(inTemp.c_str(), ios::trunc);
                        if(!in) {