working on pam

[mothur.git] / sequencedb.h

diff --git a/sequencedb.h b/sequencedb.h
index 367254949fa6a2a43a59589db159810a82499dc7..8f7640ed3f90f1feb827448120759911d2da8e21 100644 (file)
--- a/sequencedb.h
+++ b/sequencedb.h
@@ -37,12 +37,15 @@ public:
        void clear();              //clears data - remeber to loop through and delete the sequences inside or you will have a memory leak
        int size();                //returns datas size
        void print(ostream&);      //loops through data using sequence class print
+       bool sameLength() { return samelength; }
                
 private:
        vector<Sequence> data;
        string readName(ifstream&);
        string readSequence(ifstream&);
        MothurOut* m;
+       bool samelength;
+       int length;
 
 };