1.9

[mothur.git] / sequence.cpp

diff --git a/sequence.cpp b/sequence.cpp
index 19adf796b5d1d26f3a681144c6c801cdb4b4f63d..136e8934419c45182ae2116d2aead2b7374eea3d 100644 (file)
--- a/sequence.cpp
+++ b/sequence.cpp
@@ -447,23 +447,7 @@ void Sequence::reverseComplement(){
 //********************************************************************************************************************
 int Sequence::MPISend(int receiver) {
        try {
-               //send name - string
-               int length = name.length();
-               char buf[name.length()];
-               strcpy(buf, name.c_str()); 
                
-               MPI_Send(&length, 1, MPI_INT, receiver, 2001, MPI_COMM_WORLD); 
-
-               MPI_Send(&buf, length, MPI_CHAR, receiver, 2001, MPI_COMM_WORLD);
-       
-               //send aligned - string
-               length = aligned.length();
-               char buf2[aligned.length()];
-               strcpy(buf2, aligned.c_str()); 
-       
-               MPI_Send(&length, 1, MPI_INT, receiver, 2001, MPI_COMM_WORLD); 
-       
-               MPI_Send(&buf2, length, MPI_CHAR, receiver, 2001, MPI_COMM_WORLD);
        
                return 0;
 
@@ -476,24 +460,6 @@ int Sequence::MPISend(int receiver) {
 /**************************************************************************************************/
 int Sequence::MPIRecv(int sender) {
        try {
-               MPI_Status status;
-       
-               //receive name - string
-               int length;
-               MPI_Recv(&length, 1, MPI_INT, sender, 2001, MPI_COMM_WORLD, &status);
-       
-               char buf[length];
-               MPI_Recv(&buf, length, MPI_CHAR, sender, 2001, MPI_COMM_WORLD, &status);
-               name = buf;
-               
-               //receive aligned - string
-               MPI_Recv(&length, 1, MPI_INT, sender, 2001, MPI_COMM_WORLD, &status);
-       
-               char buf2[length];
-               MPI_Recv(&buf2, length, MPI_CHAR, sender, 2001, MPI_COMM_WORLD, &status);
-               aligned = buf2;
-               
-               setAligned(aligned);
                
                return 0;