added oligos, pdiffs, bdiffs, ldiffs, sdiffs, tiffs parameters to sffinfo to allow...

[mothur.git] / screenseqscommand.h

diff --git a/screenseqscommand.h b/screenseqscommand.h
index 291d8e6d1acd4605f4827159f10aa74269e1a771..771113da1bda0ee34859faaa39b2fe7be1bc2672 100644 (file)
--- a/screenseqscommand.h
+++ b/screenseqscommand.h
@@ -23,6 +23,7 @@ public:
        vector<string> setParameters();
        string getCommandName()                 { return "screen.seqs";                         }
        string getCommandCategory()             { return "Sequence Processing";         }
+       string getOutputFileNameTag(string, string);
        string getHelpString(); 
        string getCitation() { return "http://www.mothur.org/wiki/Screen.seqs"; }
        string getDescription()         { return "enables you to keep sequences that fulfill certain user defined criteria"; }
@@ -60,7 +61,6 @@ private:
        vector<string> outputNames;
        vector<string> optimize;
        map<string, int> nameMap;
-       int readNames();
        
        int getSummary(vector<unsigned long long>&);
        int createProcessesCreateSummary(vector<int>&, vector<int>&, vector<int>&, vector<int>&, vector<int>&, string);