]> git.donarmstrong.com Git - mothur.git/blobdiff - screenseqscommand.h
added checks for ^C to quit command instead of program
[mothur.git] / screenseqscommand.h
index 5b44091dbd07d044f0de288490ff0d4633495008..54f4bb153d66b89728a1d10fd073cb14f3957779 100644 (file)
@@ -21,13 +21,14 @@ public:
        void help();
        
 private:
-       void screenNameGroupFile(set<string>);
-       void screenGroupFile(set<string>);
-       void screenAlignReport(set<string>);
+       int screenNameGroupFile(set<string>);
+       int screenGroupFile(set<string>);
+       int screenAlignReport(set<string>);
        
        bool abort;
        string fastafile, namefile, groupfile, alignreport, outputDir;
        int startPos, endPos, maxAmbig, maxHomoP, minLength, maxLength;
+       vector<string> outputNames;
 };
 
 #endif