fixes while testing

[mothur.git] / screenseqscommand.cpp

diff --git a/screenseqscommand.cpp b/screenseqscommand.cpp
index 5845b8f86ae7c718c0dbc25fe351d493faff57c3..8a7a108eb322978377a9d09ffb880a2745c54caf 100644 (file)
--- a/screenseqscommand.cpp
+++ b/screenseqscommand.cpp
@@ -26,6 +26,7 @@ vector<string> ScreenSeqsCommand::getValidParameters(){
 //**********************************************************************************************************************
 ScreenSeqsCommand::ScreenSeqsCommand(){        
        try {
+               abort = true;
                //initialize outputTypes
                vector<string> tempOutNames;
                outputTypes["fasta"] = tempOutNames;