openOutputFile(reverseFile, outFASTA);
while(!inFASTA.eof()){
- Sequence currSeq(inFASTA);
- currSeq.reverseComplement();
- currSeq.printSequence(outFASTA);
+ Sequence currSeq(inFASTA); gobble(inFASTA);
+ if (currSeq.getName() != "") {
+ currSeq.reverseComplement();
+ currSeq.printSequence(outFASTA);
+ }
}
inFASTA.close();
outFASTA.close();