added dups parameter to chimera.uchime. working on make.contigs command.

[mothur.git] / removeseqscommand.h

diff --git a/removeseqscommand.h b/removeseqscommand.h
index 151b413070bc64bafd80834e72228dabd1037c43..e26e751032402cd39dac933acf3f57814ab2fc0f 100644 (file)
--- a/removeseqscommand.h
+++ b/removeseqscommand.h
@@ -37,6 +37,7 @@ class RemoveSeqsCommand : public Command {
                string accnosfile, fastafile, namefile, groupfile, countfile, alignfile, listfile, taxfile, qualfile, outputDir;
                bool abort, dups;
                vector<string> outputNames;
+        map<string, string> uniqueMap;
                
                int readFasta();
                int readName();