added count file to trim.seqs, get.groups, get.lineage, get.seqs, heatmap.sim, list...

[mothur.git] / removegroupscommand.cpp

diff --git a/removegroupscommand.cpp b/removegroupscommand.cpp
index 86ddf946a9d51c1df7e43783e0470bf5aead6301..80aeb3fbad0495b3788e518812d6740f31ac71f8 100644 (file)
--- a/removegroupscommand.cpp
+++ b/removegroupscommand.cpp
@@ -71,7 +71,7 @@ string RemoveGroupsCommand::getOutputFileNameTag(string type, string inputName="
             else if (type == "taxonomy")    {   outputFileName =  "pick" + m->getExtension(inputName);   }
             else if (type == "name")        {   outputFileName =  "pick" + m->getExtension(inputName);   }
             else if (type == "group")       {   outputFileName =  "pick" + m->getExtension(inputName);   }
-            else if (type == "count")       {   outputFileName =  "pick" + m->getExtension(inputName);   }
+            else if (type == "count")       {   outputFileName =  "pick.count.table";   }
             else if (type == "list")        {   outputFileName =  "pick" + m->getExtension(inputName);   }
             else if (type == "shared")      {   outputFileName =  "pick" + m->getExtension(inputName);   }
             else if (type == "design")      {   outputFileName =  "pick" + m->getExtension(inputName);   }