moved mothur's source into a folder to make grabbing just the source easier on github

[mothur.git] / referencedb.h

diff --git a/referencedb.h b/referencedb.h
deleted file mode 100644 (file)
index 5262e80..0000000
--- a/referencedb.h
+++ /dev/null
@@ -1,49 +0,0 @@
-#ifndef MYREFERENCEDB_H
-#define MYREFERENCEDB_H
-
-/*
- *  referencedb.h
- *  Mothur
- *
- *  Created by westcott on 6/29/11.
- *  Copyright 2011 Schloss Lab. All rights reserved.
- *
- */
-
-
-#include "mothur.h"
-#include "sequence.hpp"
-
-/***********************************************/
-
-class ReferenceDB {
-       
-       public:
-       
-               static ReferenceDB* getInstance();
-               void clearMemory();
-       
-               bool save;
-               vector<Sequence> referenceSeqs;
-               vector< vector<float> > wordGenusProb;
-               vector<diffPair> WordPairDiffArr;
-       
-               string getSavedReference()                      { return referencefile;         }
-               void setSavedReference(string p)        { referencefile = p;            }
-               string getSavedTaxonomy()                       { return taxonomyfile;          }
-               void setSavedTaxonomy(string p)         { taxonomyfile = p;                     }
-       
-       private:
-       
-               static ReferenceDB* myInstance;
-               ReferenceDB() { referencefile = ""; taxonomyfile = ""; save = false; }
-               ReferenceDB(const ReferenceDB&){}// Disable copy constructor
-               void operator=(const ReferenceDB&){} // Disable assignment operator
-               ~ReferenceDB(){ myInstance = 0; }
-       
-               string referencefile, taxonomyfile;     
-};
-/***********************************************/
-
-#endif
-