merged pat's trim seqs edits with sarah's major overhaul of global data; also added...

[mothur.git] / readotucommand.h

diff --git a/readotucommand.h b/readotucommand.h
index 586e6ef36e5ca3ab015db96b493c191612a9330a..c38d0a5f3d38916681db8b254fe11b5c9eec03f2 100644 (file)
--- a/readotucommand.h
+++ b/readotucommand.h
@@ -46,9 +46,7 @@ private:
        Command* parselist;
        GroupMap* groupMap;
        string filename, listfile, orderfile, sharedfile, line, label, groupfile, sabundfile, rabundfile, format;
-       OptionParser* parser;
-       map<string, string> parameters;
-       map<string, string>::iterator it;
+
        bool abort, allLines;
        set<int> lines; //hold lines to be used
        set<string> labels; //holds labels to be used