merged pat's trim seqs edits with sarah's major overhaul of global data; also added...

[mothur.git] / readdistcommand.h

diff --git a/readdistcommand.h b/readdistcommand.h
index b6e3ae44de298a115ce9a72de193b51ff951ea34..868d72e6bd5184b11253dc5c9aacded459f0ee3d 100644 (file)
--- a/readdistcommand.h
+++ b/readdistcommand.h
@@ -38,12 +38,10 @@ private:
        ReadMatrix* read;
        FullMatrix* matrix;
        GroupMap* groupMap;
-       string filename, format, method;
+       string distFileName, format, method;
        string phylipfile, columnfile, namefile, groupfile;
        NameAssignment* nameMap;
-       OptionParser* parser;
-       map<string, string> parameters;
-       map<string, string>::iterator it;
+
        bool abort;
 
 };