added warning about average neighbor merges around cutoff. fixed little bugs.

[mothur.git] / readdistcommand.cpp

diff --git a/readdistcommand.cpp b/readdistcommand.cpp
index 1c134f543ef45e89dd97ef6b0462b8cd3a282d67..9d38e76b10935e2ea7fe9f485e53eab662fc982e 100644 (file)
--- a/readdistcommand.cpp
+++ b/readdistcommand.cpp
@@ -208,7 +208,7 @@ int ReadDistCommand::execute(){
                        numDists = globaldata->gSparseMatrix->getNNodes();
        //cout << "matrix contains " << numDists << " distances." << endl;
                        
-      int lines = cutoff / (1.0/precision);
+    /*  int lines = cutoff / (1.0/precision);
       vector<float> dist_cutoff(lines+1,0);
                        for (int i = 0; i <= lines;i++) {       
        dist_cutoff[i] = (i + 0.5) / precision; 
@@ -224,7 +224,7 @@ int ReadDistCommand::execute(){
           }
         }
                        }
-
+*/
      // string dist_string = "Dist:";
     //  string count_string = "Count: ";
                        //for (int i = 0; i <= lines;i++) {