committing so I can work on the other machine

[mothur.git] / readblast.cpp

diff --git a/readblast.cpp b/readblast.cpp
index 49e370836bb2c9e2edd59e99d9835de8acfc5582..9979a7586f59f3827f96645439b1ae323ed8a733 100644 (file)
--- a/readblast.cpp
+++ b/readblast.cpp
@@ -311,11 +311,15 @@ int ReadBlast::readNames(NameAssignment* nameMap) {
                ifstream in;
                openInputFile(blastfile, in);
                
+               ofstream outName;
+               openOutputFile("tempOutNames", outName);
+               
                //read first line
                in >> prevName;
+       
                for (int i = 0; i < 11; i++) {  in >> hold;  }
                gobble(in);
-               
+                               
                //save name in nameMap
                nameMap->push_back(prevName);
                
@@ -324,6 +328,7 @@ int ReadBlast::readNames(NameAssignment* nameMap) {
                        
                        //read line
                        in >> name;
+       
                        for (int i = 0; i < 11; i++) {  in >> hold;  }
                        gobble(in);