]> git.donarmstrong.com Git - mothur.git/blobdiff - rarefactsharedcommand.cpp
1.23.0
[mothur.git] / rarefactsharedcommand.cpp
index b0d6650a605bb053704e9827b8366fea3aac3665..64bdbb4ceebd18f5abeff63b26fbb4d4ac3dc924 100644 (file)
@@ -162,10 +162,10 @@ RareFactSharedCommand::RareFactSharedCommand(string option)  {
                        
                        string temp;
                        temp = validParameter.validFile(parameters, "freq", false);                     if (temp == "not found") { temp = "100"; }
-                       convert(temp, freq); 
+                       m->mothurConvert(temp, freq); 
                        
                        temp = validParameter.validFile(parameters, "iters", false);                    if (temp == "not found") { temp = "1000"; }
-                       convert(temp, nIters); 
+                       m->mothurConvert(temp, nIters); 
                        
                        temp = validParameter.validFile(parameters, "jumble", false);                   if (temp == "not found") { temp = "T"; }
                        if (m->isTrue(temp)) { jumble = true; }