forced rarefaction.single to output ending line for all groups. added subsample...

[mothur.git] / rarefactcommand.h

diff --git a/rarefactcommand.h b/rarefactcommand.h
index 6aaa3de401e07f653abcd29cff4e98c868a94e4b..0e77a277e6ad7cda962a4c9476945f6b2aa6b557 100644 (file)
--- a/rarefactcommand.h
+++ b/rarefactcommand.h
@@ -50,7 +50,7 @@ private:
        vector<string> groups;
        string outputDir;
        
-       vector<string> parseSharedFile(string);
+       vector<string> parseSharedFile(string, map<string, set<int> >&);
        vector<string> createGroupFile(vector<string>&, map<int, string>);
 };