paralellized rarefaction.single

[mothur.git] / rarefact.h

diff --git a/rarefact.h b/rarefact.h
index 20c19251b132dd8ba512ab1530206546eb0bbbec..7d1fab4b16b412b56f07225acac50936b0348e77 100644 (file)
--- a/rarefact.h
+++ b/rarefact.h
@@ -11,8 +11,8 @@
 class Rarefact {
        
 public:
-       Rarefact(OrderVector* o, vector<Display*> disp) :
-                       numSeqs(o->getNumSeqs()), order(o), displays(disp), label(o->getLabel())  { m = MothurOut::getInstance(); }
+       Rarefact(OrderVector* o, vector<Display*> disp, int p) :
+                       numSeqs(o->getNumSeqs()), order(o), displays(disp), label(o->getLabel()), processors(p)  { m = MothurOut::getInstance(); }
        Rarefact(vector<SharedRAbundVector*> shared, vector<Display*> disp) :
                                         lookup(shared), displays(disp) {  globaldata = GlobalData::getInstance(); m = MothurOut::getInstance(); }
 
@@ -24,11 +24,14 @@ private:
        GlobalData* globaldata;
        OrderVector* order;
        vector<Display*> displays;
-       int numSeqs, numGroupComb;
+       int numSeqs, numGroupComb, processors;
        string label;
        void mergeVectors(SharedRAbundVector*, SharedRAbundVector*);
        vector<SharedRAbundVector*> lookup; 
        MothurOut* m;
+       
+       int createProcesses(vector<int>&, RarefactionCurveData*, int);
+       int driver(RarefactionCurveData*, int, int);
 
 };