rarefaction.shared() fixed bug

[mothur.git] / rarefact.cpp

diff --git a/rarefact.cpp b/rarefact.cpp
index 0be032727ab5dcb9294b670fe4dffcfa52a328cd..e776393b47318e8a7f9b79016433f75a8ba049d9 100644 (file)
--- a/rarefact.cpp
+++ b/rarefact.cpp
@@ -3,7 +3,7 @@
  *  Dotur
  *
  *  Created by Sarah Westcott on 11/18/08.
- *  Copyright 2008 __MyCompanyName__. All rights reserved.
+ *  Copyright 2008 Schloss Lab UMASS Amherst. All rights reserved.
  *
  */
 
@@ -115,17 +115,10 @@ try {
                        //randomize the groups
                        random_shuffle(lookup.begin(), lookup.end());
                
-                       //send the first group
-                       rcd->updateSharedData(lookup[0], lookup[0], 1, numGroupComb);
-                               
-                       //send each additional group one at a time
-                       int n = 1;
-                       for (int k = 0; k < (lookup.size() - 1); k++) { 
-                               for (int l = n; l < lookup.size(); l++) {
-                                       rcd->updateSharedData(lookup[k], lookup[l], l+1, numGroupComb);
-                                       mergeVectors(lookup[0], lookup[l]);
-                               }
-                               n++;
+                       //send each group one at a time
+                       for (int k = 0; k < lookup.size(); k++) { 
+                               rcd->updateSharedData(lookup[0], lookup[k], k+1, numGroupComb);
+                               mergeVectors(lookup[0], lookup[k]);
                        }
 
                        //resets output files