fix trim.seqs / qualscores bug

[mothur.git] / qualityscores.cpp

diff --git a/qualityscores.cpp b/qualityscores.cpp
index e26a4ffc74c54cba4c8a7ac9da4f0ba3a6ed6e5c..0641d3b7bf4ed8abc588467b946d0678766c5fb0 100644 (file)
--- a/qualityscores.cpp
+++ b/qualityscores.cpp
@@ -44,7 +44,6 @@ QualityScores::QualityScores(ifstream& qFile){
                else{
                        seqName = seqName.substr(1);
                }
-               cout << seqName << endl;
                string qScoreString = m->getline(qFile);
                while(qFile.peek() != '>' && qFile.peek() != EOF){
                        qScoreString += ' ' + m->getline(qFile);
@@ -56,7 +55,6 @@ QualityScores::QualityScores(ifstream& qFile){
                        if (m->control_pressed) { break; }
                        qScoreStringStream >> score;
                        qScores.push_back(score);
-                       cout << score << '\t' << count << endl;
                        count++;
                }
                qScores.pop_back();