fixes while testing

[mothur.git] / preclustercommand.cpp

diff --git a/preclustercommand.cpp b/preclustercommand.cpp
index e6ccc9b70455089d5dffc1c6f512f3e17ca1d76e..3a3aafc7c44fc3385bbb3284abbbc0b09701c13f 100644 (file)
--- a/preclustercommand.cpp
+++ b/preclustercommand.cpp
@@ -26,6 +26,7 @@ vector<string> PreClusterCommand::getValidParameters(){
 //**********************************************************************************************************************
 PreClusterCommand::PreClusterCommand(){        
        try {
+               abort = true;
                //initialize outputTypes
                vector<string> tempOutNames;
                outputTypes["fasta"] = tempOutNames;