added mothurgetpid function. fixed bug with align.seqs related to g++ 4.8 change...

[mothur.git] / preclustercommand.cpp

diff --git a/preclustercommand.cpp b/preclustercommand.cpp
index 05c8b7d42a1ba7de160449f02707097800357bea..9acfa650a3822a6a771d42d2740a56c8ce773930 100644 (file)
--- a/preclustercommand.cpp
+++ b/preclustercommand.cpp
@@ -390,9 +390,9 @@ int PreClusterCommand::createProcessesGroups(string newFName, string newNName, s
                                process++;
                        }else if (pid == 0){
                 outputNames.clear();
-                               num = driverGroups(newFName + toString(getpid()) + ".temp", newNName + toString(getpid()) + ".temp", newMFile, lines[process].start, lines[process].end, groups);
+                               num = driverGroups(newFName + m->mothurGetpid(process) + ".temp", newNName + m->mothurGetpid(process) + ".temp", newMFile, lines[process].start, lines[process].end, groups);
                 
-                string tempFile = toString(getpid()) + ".outputNames.temp";
+                string tempFile = m->mothurGetpid(process) + ".outputNames.temp";
                 ofstream outTemp;
                 m->openOutputFile(tempFile, outTemp);