added mothurOutJustToScreen function and changed all counter outputs to use it.

[mothur.git] / prcseqscommand.cpp

diff --git a/prcseqscommand.cpp b/prcseqscommand.cpp
index cf93cb796104aa90428e5466546c9839789216f7..8db6c24ff05ce4a5a23bc11a9021b208f5e65d55 100644 (file)
--- a/prcseqscommand.cpp
+++ b/prcseqscommand.cpp
@@ -696,10 +696,10 @@ int PcrSeqsCommand::driverPcr(string filename, string goodFasta, string badFasta
 #endif
                        
                        //report progress
-                       if((count) % 100 == 0){ m->mothurOut("Processing sequence: " + toString(count)); m->mothurOutEndLine();         }
+                       if((count) % 100 == 0){ m->mothurOutJustToScreen("Processing sequence: " + toString(count)+"\n");               }
                }
                //report progress
-               if((count) % 100 != 0){ m->mothurOut("Processing sequence: " + toString(count)); m->mothurOutEndLine();         }
+               if((count) % 100 != 0){ m->mothurOutJustToScreen("Processing sequence: " + toString(count)+"\n");       }
                
         badFile.close();
                goodFile.close();