added [ERROR] flag if command aborts

[mothur.git] / pipelinepdscommand.h

diff --git a/pipelinepdscommand.h b/pipelinepdscommand.h
index a5061599472400895d1dfc1fac41320f7a880864..289a909c9d6eef64f4ad2fe61d136592c51120b6 100644 (file)
--- a/pipelinepdscommand.h
+++ b/pipelinepdscommand.h
@@ -20,7 +20,7 @@ class PipelineCommand : public Command {
        
 public:
        PipelineCommand(string);
-       PipelineCommand() {}
+       PipelineCommand() { abort = true; calledHelp = true; }
        ~PipelineCommand();
        vector<string> getRequiredParameters();
        vector<string> getValidParameters();