]> git.donarmstrong.com Git - mothur.git/blobdiff - pintail.h
changes while testing
[mothur.git] / pintail.h
index 7164842106d7b61d36883b351167163aeb4e878a..92c399889c3be0aa0e552fe296612eb336bc8168 100644 (file)
--- a/pintail.h
+++ b/pintail.h
@@ -28,13 +28,13 @@ class Pintail : public Chimera {
                ~Pintail();
                
                int getChimeras(Sequence*);
-               int print(ostream&, ostream&);
+               Sequence print(ostream&, ostream&);
                
                void setCons(string c)          { consfile = c;  }
                void setQuantiles(string q) { quanfile = q;  }
                
                #ifdef USE_MPI
-               int print(MPI_File&, MPI_File&);
+               Sequence print(MPI_File&, MPI_File&);
                #endif
                
        private:
@@ -66,7 +66,7 @@ class Pintail : public Chimera {
                float DE;                       //DE is the deviaation for query
                vector<float> probabilityProfile;
                vector< vector<float> > quantiles;  //quantiles[0] is the vector of deviations with ceiling score of 1, quantiles[1] is the vector of deviations with ceiling score of 2...
-               vector< vector<quanMember> > quantilesMembers;  //quantiles[0] is the vector of deviations with ceiling score of 1, quantiles[1] is the vector of deviations with ceiling score of 2...
+               vector< vector<float> > quantilesMembers;  //quantiles[0] is the vector of deviations with ceiling score of 1, quantiles[1] is the vector of deviations with ceiling score of 2...
                set<int>  h;
                string mergedFilterString;