fixed bug in phylo.diversity rooting. added filename patterns and create filename...

[mothur.git] / phylotypecommand.h

diff --git a/phylotypecommand.h b/phylotypecommand.h
index 0e315ec7c4ef4fcdabc34b4037d7f8bba53cfea2..7fe10af58dde8ae842be2496376b3569df49bd29 100644 (file)
--- a/phylotypecommand.h
+++ b/phylotypecommand.h
@@ -26,8 +26,9 @@ public:
        vector<string> setParameters();
        string getCommandName()                 { return "phylotype";           }
        string getCommandCategory()             { return "Clustering";          }
-       string getOutputFileNameTag(string, string);
+       
        string getHelpString(); 
+    string getOutputPattern(string);   
        string getCitation() { return "http://www.mothur.org/wiki/Phylotype"; }
        string getDescription()         { return "cluster your sequences into OTUs based on their classifications"; }