changed the daughterLevels in classifiers summary file to reflect the classifications...

[mothur.git] / phylosummary.cpp

diff --git a/phylosummary.cpp b/phylosummary.cpp
index 5612d7bbf3eded6f86bcdce40c45048ee8edcb25..84b0861e38cc450b50b481e7efdaaa76e0831e4e 100644 (file)
--- a/phylosummary.cpp
+++ b/phylosummary.cpp
@@ -179,8 +179,15 @@ void PhyloSummary::print(ofstream& out){
                
                out << endl;
                
+               int totalChildrenInTree = 0;
+               
+               map<string,int>::iterator it;
+               for(it=tree[0].children.begin();it!=tree[0].children.end();it++){   
+                       if (tree[it->second].total != 0)  {   totalChildrenInTree++; }
+               }
+               
                //print root
-               out << tree[0].level << "\t" << tree[0].rank << "\t" << tree[0].name << "\t" << tree[0].children.size() << "\t" << tree[0].total << "\t";
+               out << tree[0].level << "\t" << tree[0].rank << "\t" << tree[0].name << "\t" << totalChildrenInTree << "\t" << tree[0].total << "\t";
                
                map<string, int>::iterator itGroup;
                if (groupmap != NULL) {
@@ -208,7 +215,15 @@ void PhyloSummary::print(int i, ofstream& out){
                for(it=tree[i].children.begin();it!=tree[i].children.end();it++){
                        
                        if (tree[it->second].total != 0)  {
-                               out << tree[it->second].level << "\t" << tree[it->second].rank << "\t" << tree[it->second].name << "\t" << tree[it->second].children.size() << "\t" << tree[it->second].total << "\t";
+                       
+                               int totalChildrenInTree = 0;
+               
+                               map<string,int>::iterator it2;
+                               for(it2=tree[it->second].children.begin();it2!=tree[it->second].children.end();it2++){   
+                                       if (tree[it2->second].total != 0)  {   totalChildrenInTree++; }
+                               }
+                       
+                               out << tree[it->second].level << "\t" << tree[it->second].rank << "\t" << tree[it->second].name << "\t" << totalChildrenInTree << "\t" << tree[it->second].total << "\t";
                                
                                map<string, int>::iterator itGroup;
                                if (groupmap != NULL) {