fixed bug in phylo.diversity rooting. added filename patterns and create filename...

[mothur.git] / phylodiversitycommand.h

diff --git a/phylodiversitycommand.h b/phylodiversitycommand.h
index ee76f05697cfce07213857432c9d786b150fc033..ec372ba20acac93709ca4fff0b58c8a42dadf048 100644 (file)
--- a/phylodiversitycommand.h
+++ b/phylodiversitycommand.h
@@ -25,8 +25,9 @@ class PhyloDiversityCommand : public Command {
                vector<string> setParameters();
                string getCommandName()                 { return "phylo.diversity";                     }
                string getCommandCategory()             { return "Hypothesis Testing";          }
-               string getOutputFileNameTag(string, string);
+               
        string getHelpString(); 
+    string getOutputPattern(string);   
                string getCitation() { return "Faith DP (1994). Phylogenetic pattern and the quantification of organismal biodiversity. Philos Trans R Soc Lond B Biol Sci 345: 45-58. \nhttp://www.mothur.org/wiki/Phylo.diversity"; }
                string getDescription()         { return "phylo.diversity"; }