fixes while testing

[mothur.git] / phylodiversitycommand.cpp

diff --git a/phylodiversitycommand.cpp b/phylodiversitycommand.cpp
index 1c90eca1180acc6287b0530e9c9d3e84fbea120d..efa14cd7069266ebfedb41018de0120327a145a9 100644 (file)
--- a/phylodiversitycommand.cpp
+++ b/phylodiversitycommand.cpp
@@ -24,6 +24,7 @@ vector<string> PhyloDiversityCommand::getValidParameters(){
 //**********************************************************************************************************************
 PhyloDiversityCommand::PhyloDiversityCommand(){        
        try {
+               abort = true;
                //initialize outputTypes
                vector<string> tempOutNames;
                outputTypes["phylodiv"] = tempOutNames;