some minor changes

[mothur.git] / pcoacommand.cpp

diff --git a/pcoacommand.cpp b/pcoacommand.cpp
index d8efb2551e2bb6b2f459f14ad041c188f31926da..4be5ffb8c5b63c4202666aecd57ec58c2be05374 100644 (file)
--- a/pcoacommand.cpp
+++ b/pcoacommand.cpp
@@ -197,7 +197,7 @@ int PCOACommand::execute(){
                                
                                double corr = linearCalc.calcPearson(EuclidDists, D); //G is the pcoa file, D is the users distance matrix
                                
-                               m->mothurOut("Pearson's coefficient using " + toString(i) + " axis: " + toString(corr)); m->mothurOutEndLine();
+                               m->mothurOut("Rsq " + toString(i) + " axis: " + toString(corr * corr)); m->mothurOutEndLine();
                                
                                if (m->control_pressed) { for (int i = 0; i < outputNames.size(); i++) {        remove(outputNames[i].c_str());  } return 0; }
                        }