fixes while testing

[mothur.git] / pcacommand.cpp

diff --git a/pcacommand.cpp b/pcacommand.cpp
index 4a4e55e2c01788141dc6d1173e3e14ed768d1fec..ee0a5462de87049f6b026546492203be630ea8d7 100644 (file)
--- a/pcacommand.cpp
+++ b/pcacommand.cpp
@@ -25,6 +25,7 @@ vector<string> PCACommand::getValidParameters(){
 //**********************************************************************************************************************
 PCACommand::PCACommand(){      
        try {
+               abort = true;
                //initialize outputTypes
                vector<string> tempOutNames;
                outputTypes["pcoa"] = tempOutNames;