1.20.0

[mothur.git] / pcacommand.cpp

diff --git a/pcacommand.cpp b/pcacommand.cpp
index 5eed4566a74565c5641720dd519ae4df77e90b31..8dee743e07bd4fb546d907e41fd7ab97f6f71664 100644 (file)
--- a/pcacommand.cpp
+++ b/pcacommand.cpp
@@ -319,7 +319,6 @@ int PCACommand::process(vector<SharedRAbundFloatVector*>& lookupFloat){
                vector< vector<double> > matrix(numSamples);
                vector<double> colMeans(numOTUs);
                
-                               
                //fill matrix with shared relative abundances, re-center
                for (int i = 0; i < lookupFloat.size(); i++) {
                        matrix[i].resize(numOTUs, 0);
@@ -427,7 +426,7 @@ void PCACommand::output(string fnameRoot, vector<string> name_list, vector<vecto
                }
                pcaData << endl;
                
-               for(int i=0;i<numEigenValues;i++){
+               for(int i=0;i<name_list.size();i++){
                        pcaData << name_list[i] << '\t';
                        for(int j=0;j<numEigenValues;j++){
                                pcaData << G[i][j] << '\t';