added command descriptions

[mothur.git] / parsimonycommand.h

diff --git a/parsimonycommand.h b/parsimonycommand.h
index 5e5484f4687474886730e437ea3d44d6aced3ccb..81fa99ba06c691f9e0ee06f4b73521655b046e8c 100644 (file)
--- a/parsimonycommand.h
+++ b/parsimonycommand.h
@@ -30,7 +30,8 @@ public:
        string getCommandCategory()             { return "Hypothesis Testing";          }
        string getHelpString(); 
        string getCitation() { return "Slatkin M, Maddison WP (1989). A cladistic measure of gene flow inferred from the phylogenies of alleles. Genetics 123: 603-13. \nSlatkin M, Maddison WP (1990). Detecting isolation by distance using phylogenies of genes. Genetics 126: 249-60. \nMartin AP (2002). Phylogenetic approaches for describing and comparing the diversity of microbial communities. Appl Environ Microbiol 68: 3673-82. \nSchloss PD, Handelsman J (2006). Introducing TreeClimber, a test to compare microbial community structure. Appl Environ Microbiol 72: 2379-84.\nhttp://www.mothur.org/wiki/Parsimony"; }
-       
+       string getDescription()         { return "generic test that describes whether two or more communities have the same structure"; }
+
        int execute();
        void help() { m->mothurOut(getHelpString()); }