some changes while testing 1.9

[mothur.git] / parsesffcommand.cpp

diff --git a/parsesffcommand.cpp b/parsesffcommand.cpp
index ed26be014d3b826bef6ec6eabaee2c035e1d967a..d210ce811a78c61b77fd8728a8d9fca650f3a7dc 100644 (file)
--- a/parsesffcommand.cpp
+++ b/parsesffcommand.cpp
@@ -453,7 +453,6 @@ bool ParseSFFCommand::screenSeq(string& sequence, int& group){
                }
        }
        
-       
        int fPrimer = 1;
        for(int i=0;i<numFPrimers;i++){
                if(compareDNASeq(forPrimer[i], sequence.substr(barcodeLength,forPrimer[i].length()))){
@@ -464,7 +463,7 @@ bool ParseSFFCommand::screenSeq(string& sequence, int& group){
                        fPrimer = 0;
                }
        }
-       
+
        int rPrimer = 1;
        for(int i=0;i<numRPrimers;i++){
                if(compareDNASeq(revPrimer[i], sequence.substr(sequence.length()-revPrimer[i].length(),revPrimer[i].length()))){