added classify.shared command and random forest files. added count file to pcr.seqs...

[mothur.git] / parsefastaqcommand.h

diff --git a/parsefastaqcommand.h b/parsefastaqcommand.h
index 4481b98bb23bdbcd47a6059b2df0904c176ae9bf..96fcb7d6799358ff4e10f930d1ad4165763b46a0 100644 (file)
--- a/parsefastaqcommand.h
+++ b/parsefastaqcommand.h
@@ -34,10 +34,11 @@ public:
 private:
 
        vector<string> outputNames;     
-       string outputDir, fastaQFile;
+       string outputDir, fastaQFile, format;
        bool abort, fasta, qual;
        
        vector<int> convertQual(string);
+    vector<char> convertTable;
 };
 
 #endif