added modify names parameter to set.dir

[mothur.git] / parsefastaqcommand.h

diff --git a/parsefastaqcommand.h b/parsefastaqcommand.h
index cb86bd66c0ae8597f605006893fd70371d16b5fc..5ae6b9c482fe6b4022bb4d4c5d4ae2e79ea3aad8 100644 (file)
--- a/parsefastaqcommand.h
+++ b/parsefastaqcommand.h
@@ -36,7 +36,7 @@ private:
 
        vector<string> outputNames;     
        string outputDir, fastaQFile, format;
-       bool abort, fasta, qual;
+       bool abort, fasta, qual, pacbio;
        
        vector<int> convertQual(string);
     vector<char> convertTable;