added modify names parameter to set.dir

[mothur.git] / otuhierarchycommand.h

diff --git a/otuhierarchycommand.h b/otuhierarchycommand.h
index b82ee7606cdafba5c3f392546cb82858eb8aad8b..cd106ece49d90dcfe28a0d272b672919281a912b 100644 (file)
--- a/otuhierarchycommand.h
+++ b/otuhierarchycommand.h
@@ -24,7 +24,12 @@ public:
        vector<string> setParameters();
        string getCommandName()                 { return "otu.hierarchy";                       }
        string getCommandCategory()             { return "OTU-Based Approaches";        }
+       
        string getHelpString(); 
+    string getOutputPattern(string);   
+       string getCitation() { return "http://www.mothur.org/wiki/Otu.hierarchy"; }
+       string getDescription()         { return "relates OTUs at different distances"; }
+
        
        int execute(); 
        void help() { m->mothurOut(getHelpString()); }