moved mothur's source into a folder to make grabbing just the source easier on github

[mothur.git] / otuhierarchycommand.h

diff --git a/otuhierarchycommand.h b/otuhierarchycommand.h
deleted file mode 100644 (file)
index 8a2c862..0000000
--- a/otuhierarchycommand.h
+++ /dev/null
@@ -1,50 +0,0 @@
-#ifndef OTUHIERARCHYCOMMAND_H
-#define OTUHIERARCHYCOMMAND_H
-/*
- *  otuhierarchycommand.h
- *  Mothur
- *
- *  Created by westcott on 1/19/10.
- *  Copyright 2010 Schloss Lab. All rights reserved.
- *
- */
-
-#include "command.hpp"
-#include "listvector.hpp"
-
-//**********************************************************************************************************************
-
-class OtuHierarchyCommand : public Command {
-
-public:
-       OtuHierarchyCommand(string);
-       OtuHierarchyCommand();
-       ~OtuHierarchyCommand(){}
-       
-       vector<string> setParameters();
-       string getCommandName()                 { return "otu.hierarchy";                       }
-       string getCommandCategory()             { return "OTU-Based Approaches";        }
-       string getHelpString(); 
-       string getCitation() { return "http://www.mothur.org/wiki/Otu.hierarchy"; }
-       string getDescription()         { return "relates OTUs at different distances"; }
-
-       
-       int execute(); 
-       void help() { m->mothurOut(getHelpString()); }  
-       
-       
-private:
-       bool abort;
-       set<string> labels; //holds labels to be used
-       string label, listFile, outputDir, output;
-       vector<string> outputNames;
-       
-       vector<ListVector> getListVectors();
-               
-};
-
-//**********************************************************************************************************************
-
-#endif
-
-